#!/bin/bash

# Submit a serial pmemd job

export AMBERHOME=/programs/amber12
export PATH=$AMBERHOME:/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/programs/bin:/usr/local/bin:/bin:/usr/bin:/opt/torque/bin:/scratch1/lachele/bin:/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/programs/bin:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/opt/torque/bin
export LD_LIBRARY_PATH=/programs/lib:/usr/local/lib:::/programs/lib:/usr/local/lib


# Production Restart
#
/programs/amber12/bin/pmemd \
 -p ../input/4_SolCl.parm7 \
 -c prod.rst7 \
 -i prod_restart.in \
 -o prod2.o \
 -r prod2.rst7 \
 -x prod2.nc \
 -inf prod2.info \
 -l prod2.log 
#

