Index of /files/2020/Mucin-Like-alpha-Dystroglycan/TREATED/d4g/ANALYSIS/TESTBRIDGE/
../
Bridged_water_example 09-Jan-2015 00:16 75691
Bridged_water_example.jpg 09-Jan-2015 00:50 42185
Bridged_water_example.tga 09-Jan-2015 00:16 3576882
Bridged_water_example.vmd 09-Jan-2015 00:56 23468
Bridged_water_example_README 09-Jan-2015 00:56 19
Bridged_water_example_hires 08-Mar-2017 08:29 75691
Bridged_water_example_hires.png 08-Mar-2017 08:31 313045
Bridged_water_example_hires.tga 08-Mar-2017 08:30 14307474
Bridged_water_example_hires.xcf 08-Mar-2017 08:31 432183
Distance_All_Explicit_Frames_cpptraj.in 04-Jan-2015 07:35 624
Distance_H-H_Explicit_1_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_H-H_Explicit_2_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_H-H_Explicit_3_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_H-H_Explicit_4_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_H-H_TEST_4Way-noBridge_1_cpptraj.out 30-Sep-2014 20:47 503480
Distance_H-H_TEST_4Way-noBridge_2_cpptraj.out 30-Sep-2014 20:48 465220
Distance_H-H_TEST_4Way-noBridge_3_cpptraj.out 30-Sep-2014 20:48 455920
Distance_H-H_TEST_4Way-noBridge_4_cpptraj.out 30-Sep-2014 20:48 400800
Distance_H-H_TEST_4Ways_1_cpptraj.out 30-Sep-2014 20:47 576500
Distance_H-H_TEST_4Ways_2_cpptraj.out 30-Sep-2014 20:47 576240
Distance_H-H_TEST_4Ways_3_cpptraj.out 30-Sep-2014 20:47 576640
Distance_H-H_TEST_4Ways_4_cpptraj.out 30-Sep-2014 20:47 576140
Distance_H-H_TEST_Bridge-no4Way_1_cpptraj.out 30-Sep-2014 20:48 20
Distance_H-H_TEST_Bridge-no4Way_2_cpptraj.out 30-Sep-2014 20:48 20
Distance_H-H_TEST_Bridge-no4Way_4_cpptraj.out 30-Sep-2014 20:48 20
Distance_H-H_TEST_Bridge_bonds_1_cpptraj.out 30-Sep-2014 20:48 73060
Distance_H-H_TEST_Bridge_bonds_2_cpptraj.out 30-Sep-2014 20:48 111060
Distance_H-H_TEST_Bridge_bonds_3_cpptraj.out 30-Sep-2014 20:48 120720
Distance_H-H_TEST_Bridge_bonds_4_cpptraj.out 30-Sep-2014 20:48 175360
Distance_H-H_TEST_all_frames_NoWAT_1_cpptraj.out 30-Sep-2014 20:46 576640
Distance_H-H_TEST_all_frames_NoWAT_2_cpptraj.out 30-Sep-2014 20:46 576640
Distance_H-H_TEST_all_frames_NoWAT_3_cpptraj.out 30-Sep-2014 20:46 576640
Distance_H-H_TEST_all_frames_NoWAT_4_cpptraj.out 30-Sep-2014 20:47 576640
Distance_HH+OO_Explicit_1_cpptraj.out 04-Jan-2015 07:37 12709560
Distance_HH+OO_Explicit_2_cpptraj.out 04-Jan-2015 07:38 12709560
Distance_HH+OO_Explicit_3_cpptraj.out 04-Jan-2015 07:39 12709560
Distance_HH+OO_Explicit_4_cpptraj.out 04-Jan-2015 07:39 12709560
Distance_HH+OO_TEST_4Way-noBridge_1_cpptraj.out 30-Sep-2014 20:47 1006960
Distance_HH+OO_TEST_4Way-noBridge_2_cpptraj.out 30-Sep-2014 20:48 930440
Distance_HH+OO_TEST_4Way-noBridge_3_cpptraj.out 30-Sep-2014 20:48 911840
Distance_HH+OO_TEST_4Way-noBridge_4_cpptraj.out 30-Sep-2014 20:48 801600
Distance_HH+OO_TEST_4Ways_1_cpptraj.out 30-Sep-2014 20:47 1153000
Distance_HH+OO_TEST_4Ways_2_cpptraj.out 30-Sep-2014 20:47 1152480
Distance_HH+OO_TEST_4Ways_3_cpptraj.out 30-Sep-2014 20:47 1153280
Distance_HH+OO_TEST_4Ways_4_cpptraj.out 30-Sep-2014 20:47 1152280
Distance_HH+OO_TEST_Bridge-no4Way_1_cpptraj.out 30-Sep-2014 20:48 40
Distance_HH+OO_TEST_Bridge-no4Way_2_cpptraj.out 30-Sep-2014 20:48 40
Distance_HH+OO_TEST_Bridge-no4Way_3_cpptraj.out 30-Sep-2014 20:48 0
Distance_HH+OO_TEST_Bridge-no4Way_4_cpptraj.out 30-Sep-2014 20:48 40
Distance_HH+OO_TEST_Bridge_bonds_1_cpptraj.out 30-Sep-2014 20:48 146120
Distance_HH+OO_TEST_Bridge_bonds_2_cpptraj.out 30-Sep-2014 20:48 222120
Distance_HH+OO_TEST_Bridge_bonds_3_cpptraj.out 30-Sep-2014 20:48 241440
Distance_HH+OO_TEST_Bridge_bonds_4_cpptraj.out 30-Sep-2014 20:48 350720
Distance_HH+OO_TEST_all_frames_NoWAT_1_cpptraj.out 30-Sep-2014 20:46 1153280
Distance_HH+OO_TEST_all_frames_NoWAT_2_cpptraj.out 30-Sep-2014 20:46 1153280
Distance_HH+OO_TEST_all_frames_NoWAT_3_cpptraj.out 30-Sep-2014 20:46 1153280
Distance_HH+OO_TEST_all_frames_NoWAT_4_cpptraj.out 30-Sep-2014 20:47 1153280
Distance_O-O_Explicit_1_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_O-O_Explicit_2_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_O-O_Explicit_3_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_O-O_Explicit_4_cpptraj.out 04-Jan-2015 07:36 6354780
Distance_O-O_TEST_4Way-noBridge_1_cpptraj.out 30-Sep-2014 20:47 503480
Distance_O-O_TEST_4Way-noBridge_2_cpptraj.out 30-Sep-2014 20:48 465220
Distance_O-O_TEST_4Way-noBridge_3_cpptraj.out 30-Sep-2014 20:48 455920
Distance_O-O_TEST_4Way-noBridge_4_cpptraj.out 30-Sep-2014 20:48 400800
Distance_O-O_TEST_4Ways_1_cpptraj.out 30-Sep-2014 20:47 576500
Distance_O-O_TEST_4Ways_2_cpptraj.out 30-Sep-2014 20:47 576240
Distance_O-O_TEST_4Ways_3_cpptraj.out 30-Sep-2014 20:47 576640
Distance_O-O_TEST_4Ways_4_cpptraj.out 30-Sep-2014 20:47 576140
Distance_O-O_TEST_Bridge-no4Way_1_cpptraj.out 30-Sep-2014 20:48 20
Distance_O-O_TEST_Bridge-no4Way_2_cpptraj.out 30-Sep-2014 20:48 20
Distance_O-O_TEST_Bridge-no4Way_4_cpptraj.out 30-Sep-2014 20:48 20
Distance_O-O_TEST_Bridge_bonds_1_cpptraj.out 30-Sep-2014 20:48 73060
Distance_O-O_TEST_Bridge_bonds_2_cpptraj.out 30-Sep-2014 20:48 111060
Distance_O-O_TEST_Bridge_bonds_3_cpptraj.out 30-Sep-2014 20:48 120720
Distance_O-O_TEST_Bridge_bonds_4_cpptraj.out 30-Sep-2014 20:48 175360
Distance_O-O_TEST_all_frames_NoWAT_1_cpptraj.out 30-Sep-2014 20:46 576640
Distance_O-O_TEST_all_frames_NoWAT_2_cpptraj.out 30-Sep-2014 20:46 576640
Distance_O-O_TEST_all_frames_NoWAT_3_cpptraj.out 30-Sep-2014 20:46 576640
Distance_O-O_TEST_all_frames_NoWAT_4_cpptraj.out 30-Sep-2014 20:47 576640
Distance_TEST_4Way-noBridge_1_cpptraj.in 30-Sep-2014 20:47 273
Distance_TEST_4Way-noBridge_2_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_4Way-noBridge_3_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_4Way-noBridge_4_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_4Ways_1_cpptraj.in 30-Sep-2014 20:47 249
Distance_TEST_4Ways_2_cpptraj.in 30-Sep-2014 20:47 249
Distance_TEST_4Ways_3_cpptraj.in 30-Sep-2014 20:47 249
Distance_TEST_4Ways_4_cpptraj.in 30-Sep-2014 20:47 249
Distance_TEST_Bridge-no4Way_1_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_Bridge-no4Way_2_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_Bridge-no4Way_3_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_Bridge-no4Way_4_cpptraj.in 30-Sep-2014 20:48 273
Distance_TEST_Bridge_bonds_1_cpptraj.in 30-Sep-2014 20:48 270
Distance_TEST_Bridge_bonds_2_cpptraj.in 30-Sep-2014 20:48 270
Distance_TEST_Bridge_bonds_3_cpptraj.in 30-Sep-2014 20:48 270
Distance_TEST_Bridge_bonds_4_cpptraj.in 30-Sep-2014 20:48 270
Distance_TEST_all_frames_NoWAT_1_cpptraj.in 30-Sep-2014 20:46 280
Distance_TEST_all_frames_NoWAT_2_cpptraj.in 30-Sep-2014 20:46 280
Distance_TEST_all_frames_NoWAT_3_cpptraj.in 30-Sep-2014 20:46 280
Distance_TEST_all_frames_NoWAT_4_cpptraj.in 30-Sep-2014 20:46 280
HH-OO_Bridge-vs-No_3_multi.jpg 09-Jan-2015 01:22 409091
HH-OO_Bridge-vs-No_3_multi.plot 09-Jan-2015 01:20 171
HH-OO_Bridge-vs-No_3_multi.ps 09-Jan-2015 01:20 50795
HH-OO_Bridge_3.plot 09-Jan-2015 01:19 562
HH-OO_No-Bridge_3.plot 09-Jan-2015 01:18 566
HH-OO_TEST_4Way-noBridge_3_XYZ_bins.txt 09-Jan-2015 01:00 508493
HH-OO_TEST_Bridge_bonds_3_XYZ_bins.txt 09-Jan-2015 01:00 508061
Karplus_TEST_4Way-noBridge_1_cpptraj.in 30-Sep-2014 20:47 293
Karplus_TEST_4Way-noBridge_1_cpptraj.out 30-Sep-2014 20:47 881125
Karplus_TEST_4Way-noBridge_2_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_4Way-noBridge_2_cpptraj.out 30-Sep-2014 20:48 814170
Karplus_TEST_4Way-noBridge_3_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_4Way-noBridge_3_cpptraj.out 30-Sep-2014 20:48 797895
Karplus_TEST_4Way-noBridge_4_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_4Way-noBridge_4_cpptraj.out 30-Sep-2014 20:48 701435
Karplus_TEST_4Ways_1_cpptraj.in 30-Sep-2014 20:47 269
Karplus_TEST_4Ways_1_cpptraj.out 30-Sep-2014 20:47 1008910
Karplus_TEST_4Ways_2_cpptraj.in 30-Sep-2014 20:47 269
Karplus_TEST_4Ways_2_cpptraj.out 30-Sep-2014 20:47 1008455
Karplus_TEST_4Ways_3_cpptraj.in 30-Sep-2014 20:47 269
Karplus_TEST_4Ways_3_cpptraj.out 30-Sep-2014 20:47 1009155
Karplus_TEST_4Ways_4_cpptraj.in 30-Sep-2014 20:47 269
Karplus_TEST_4Ways_4_cpptraj.out 30-Sep-2014 20:47 1008280
Karplus_TEST_Bridge-no4Way_1_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_Bridge-no4Way_1_cpptraj.out 30-Sep-2014 20:48 70
Karplus_TEST_Bridge-no4Way_2_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_Bridge-no4Way_2_cpptraj.out 30-Sep-2014 20:48 70
Karplus_TEST_Bridge-no4Way_3_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_Bridge-no4Way_4_cpptraj.in 30-Sep-2014 20:48 293
Karplus_TEST_Bridge-no4Way_4_cpptraj.out 30-Sep-2014 20:48 70
Karplus_TEST_Bridge_bonds_1_cpptraj.in 30-Sep-2014 20:48 290
Karplus_TEST_Bridge_bonds_1_cpptraj.out 30-Sep-2014 20:48 127890
Karplus_TEST_Bridge_bonds_2_cpptraj.in 30-Sep-2014 20:48 290
Karplus_TEST_Bridge_bonds_2_cpptraj.out 30-Sep-2014 20:48 194390
Karplus_TEST_Bridge_bonds_3_cpptraj.in 30-Sep-2014 20:48 290
Karplus_TEST_Bridge_bonds_3_cpptraj.out 30-Sep-2014 20:48 211295
Karplus_TEST_Bridge_bonds_4_cpptraj.in 30-Sep-2014 20:48 290
Karplus_TEST_Bridge_bonds_4_cpptraj.out 30-Sep-2014 20:48 306915
Karplus_TEST_all_frames_NoWAT_1_cpptraj.in 30-Sep-2014 20:46 300
Karplus_TEST_all_frames_NoWAT_1_cpptraj.out 30-Sep-2014 20:46 1009155
Karplus_TEST_all_frames_NoWAT_2_cpptraj.in 30-Sep-2014 20:46 300
Karplus_TEST_all_frames_NoWAT_2_cpptraj.out 30-Sep-2014 20:46 1009155
Karplus_TEST_all_frames_NoWAT_3_cpptraj.in 30-Sep-2014 20:46 300
Karplus_TEST_all_frames_NoWAT_3_cpptraj.out 30-Sep-2014 20:46 1009155
Karplus_TEST_all_frames_NoWAT_4_cpptraj.in 30-Sep-2014 20:46 300
Karplus_TEST_all_frames_NoWAT_4_cpptraj.out 30-Sep-2014 20:46 1009155
PhiPsi_TEST_4Way-noBridge_1_cpptraj.in 30-Sep-2014 20:47 490
PhiPsi_TEST_4Way-noBridge_1_cpptraj.out 30-Sep-2014 20:47 1535675
PhiPsi_TEST_4Way-noBridge_2_cpptraj.in 30-Sep-2014 20:47 490
PhiPsi_TEST_4Way-noBridge_2_cpptraj.out 30-Sep-2014 20:48 1418982
PhiPsi_TEST_4Way-noBridge_3_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_4Way-noBridge_3_cpptraj.out 30-Sep-2014 20:48 1390617
PhiPsi_TEST_4Way-noBridge_4_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_4Way-noBridge_4_cpptraj.out 30-Sep-2014 20:48 1222501
PhiPsi_TEST_4Ways_1_cpptraj.in 30-Sep-2014 20:47 450
PhiPsi_TEST_4Ways_1_cpptraj.out 30-Sep-2014 20:47 1758386
PhiPsi_TEST_4Ways_2_cpptraj.in 30-Sep-2014 20:47 450
PhiPsi_TEST_4Ways_2_cpptraj.out 30-Sep-2014 20:47 1757593
PhiPsi_TEST_4Ways_3_cpptraj.in 30-Sep-2014 20:47 450
PhiPsi_TEST_4Ways_3_cpptraj.out 30-Sep-2014 20:47 1758813
PhiPsi_TEST_4Ways_4_cpptraj.in 30-Sep-2014 20:47 450
PhiPsi_TEST_4Ways_4_cpptraj.out 30-Sep-2014 20:47 1757288
PhiPsi_TEST_Bridge-no4Way_1_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_Bridge-no4Way_1_cpptraj.out 30-Sep-2014 20:48 122
PhiPsi_TEST_Bridge-no4Way_2_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_Bridge-no4Way_2_cpptraj.out 30-Sep-2014 20:48 122
PhiPsi_TEST_Bridge-no4Way_3_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_Bridge-no4Way_4_cpptraj.in 30-Sep-2014 20:48 490
PhiPsi_TEST_Bridge-no4Way_4_cpptraj.out 30-Sep-2014 20:48 122
PhiPsi_TEST_Bridge_bonds_1_cpptraj.in 30-Sep-2014 20:48 485
PhiPsi_TEST_Bridge_bonds_1_cpptraj.out 30-Sep-2014 20:48 222894
PhiPsi_TEST_Bridge_bonds_2_cpptraj.in 30-Sep-2014 20:48 485
PhiPsi_TEST_Bridge_bonds_2_cpptraj.out 30-Sep-2014 20:48 338794
PhiPsi_TEST_Bridge_bonds_3_cpptraj.in 30-Sep-2014 20:48 485
PhiPsi_TEST_Bridge_bonds_3_cpptraj.out 30-Sep-2014 20:48 368257
PhiPsi_TEST_Bridge_bonds_4_cpptraj.in 30-Sep-2014 20:48 485
PhiPsi_TEST_Bridge_bonds_4_cpptraj.out 30-Sep-2014 20:48 534909
PhiPsi_TEST_all_frames_NoWAT_1_cpptraj.in 30-Sep-2014 20:46 503
PhiPsi_TEST_all_frames_NoWAT_1_cpptraj.out 30-Sep-2014 20:46 1758813
PhiPsi_TEST_all_frames_NoWAT_2_cpptraj.in 30-Sep-2014 20:46 503
PhiPsi_TEST_all_frames_NoWAT_2_cpptraj.out 30-Sep-2014 20:46 1758813
PhiPsi_TEST_all_frames_NoWAT_3_cpptraj.in 30-Sep-2014 20:46 503
PhiPsi_TEST_all_frames_NoWAT_3_cpptraj.out 30-Sep-2014 20:46 1758813
PhiPsi_TEST_all_frames_NoWAT_4_cpptraj.in 30-Sep-2014 20:46 503
PhiPsi_TEST_all_frames_NoWAT_4_cpptraj.out 30-Sep-2014 20:46 1758813
Run_messages.txt 22-Sep-2014 16:52 280
TEST_4Way-noBridge_1.mdcrd 22-Sep-2014 17:42 158445201
TEST_4Way-noBridge_2.mdcrd 22-Sep-2014 17:42 146404779
TEST_4Way-noBridge_3.mdcrd 22-Sep-2014 17:42 143478069
TEST_4Way-noBridge_4.mdcrd 22-Sep-2014 17:42 126131805
TEST_4Ways_1.mdcrd 22-Sep-2014 17:42 181424583
TEST_4Ways_2.mdcrd 22-Sep-2014 17:42 181342761
TEST_4Ways_3.mdcrd 22-Sep-2014 17:42 181468641
TEST_4Ways_4.mdcrd 22-Sep-2014 17:42 181311291
TEST_Bridge-no4Way_1.mdcrd 22-Sep-2014 17:42 6432
TEST_Bridge-no4Way_2.mdcrd 22-Sep-2014 17:42 6432
TEST_Bridge-no4Way_3.mdcrd 22-Sep-2014 17:42 65
TEST_Bridge-no4Way_4.mdcrd 22-Sep-2014 17:42 6432
TEST_Bridge_bonds_1.dat 22-Sep-2014 17:42 361778
TEST_Bridge_bonds_1.mdcrd 22-Sep-2014 17:42 23258681
TEST_Bridge_bonds_2.dat 22-Sep-2014 17:42 549878
TEST_Bridge_bonds_2.mdcrd 22-Sep-2014 17:42 35355981
TEST_Bridge_bonds_3.dat 22-Sep-2014 17:42 597695
TEST_Bridge_bonds_3.mdcrd 22-Sep-2014 17:42 38431242
TEST_Bridge_bonds_3.txt 22-Sep-2014 17:42 597695
TEST_Bridge_bonds_3_count_persistence.ods 09-Jan-2015 01:50 190475
TEST_Bridge_bonds_4.dat 22-Sep-2014 17:42 868163
TEST_Bridge_bonds_4.mdcrd 22-Sep-2014 17:42 55825886
TEST_Closest_O_b_1.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_b_2.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_b_3.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_b_4.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_g_1.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_g_2.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_g_3.dat 22-Sep-2014 17:42 1528181
TEST_Closest_O_g_4.dat 22-Sep-2014 17:42 1528181
TEST_Plain_bonds_b_1.dat 22-Sep-2014 17:42 1159702
TEST_Plain_bonds_b_2.dat 22-Sep-2014 17:42 1866629
TEST_Plain_bonds_b_3.dat 22-Sep-2014 17:42 2133718
TEST_Plain_bonds_b_4.dat 22-Sep-2014 17:42 1990962
TEST_Plain_bonds_g_1.dat 22-Sep-2014 17:42 937113
TEST_Plain_bonds_g_2.dat 22-Sep-2014 17:42 1205804
TEST_Plain_bonds_g_3.dat 22-Sep-2014 17:42 1210610
TEST_Plain_bonds_g_4.dat 22-Sep-2014 17:42 1215772
TEST_all_frames_NoWAT.mdcrd 22-Sep-2014 17:42 181468648
TEST_log.txt 30-Sep-2014 20:48 10335
TEST_logfile.txt 22-Sep-2014 17:42 146
TEST_summary.txt 22-Sep-2014 17:42 16734
persistence_at_3.jpg 09-Jan-2015 02:00 219017
persistence_at_3.plot 09-Jan-2015 01:59 299
persistence_at_3.ps 09-Jan-2015 21:16 22591
persistence_at_3.txt 09-Jan-2015 01:51 1798